Displaying 1 to 5 from 5 results

RSKImageCropper - An image cropper / photo cropper for iOS like in the Contacts app with support for landscape orientation

  •    Objective-C

An image cropper for iOS like in the Contacts app with support for landscape orientation. RSKImageCropper requires iOS 6.0 or later.

Guitar - A Cross-Platform String and Regular Expression Library written in Swift.

  •    Swift

This library seeks to add common string manipulation functions, including common regular expression capabilities, that are needed in both mobile and server-side development, but are missing in Swift's Standard Library. The full documentation can be found at http://www.sabintsev.com/Guitar/.

fastp - An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting...)

  •    C++

A tool designed to provide fast all-in-one preprocessing for FastQ files. This tool is developed in C++ with multithreading supported to afford high performance. By default, the HTML report is saved to fastp.html (can be specified with -h option), and the JSON report is saved to fastp.json (can be specified with -j option).

atropos - An NGS read trimming tool that is specific, sensitive, and speedy. (production)

  •    Python

Atropos is available from pypi and can be installed using pip. There is an Atropos recipe in Bioconda.




AfterQC - Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data

  •    Python

The author has reimplemented this tool in C++ with multithreading support to make it much faster. The new tool is called fastp and can be found at: https://github.com/OpenGene/fastp . If you prefer a C++ based tool, please use fastp instead. AfterQC is compitable with PyPy. Using PyPy to run AfterQC is strongly suggested since it can make AfterQC 3X faster than native Python (CPython).  To run with pypy, just replace python with pypy in the commands.






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