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Atom-Beautify respects the core.telemetryConsent configuration option from Atom editor. If you do not wish to have usage data sent to Google Analytics then please set core.telemetryConsent to no or undecided option before using Atom-Beautify. See Anonymous Analytics section of docs for details. Thank you. Atom-Beautify is going to be completely rewritten with Unibeautify at its core! See unibeautify branch for work in progress and Issue #1174.
Apex, while not officially supported by uncrustify, is also supported by the extension and will be formatted as if it was Java. On most Linux distributions, macOS (if brew is installed) and Windows, uncrustify can be installed by the extension automatically.