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NiftyNet - An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy

  •    Python

NiftyNet is a consortium of research organisations (BMEIS -- School of Biomedical Engineering and Imaging Sciences, King's College London; WEISS -- Wellcome EPSRC Centre for Interventional and Surgical Sciences, UCL; CMIC -- Centre for Medical Image Computing, UCL; HIG -- High-dimensional Imaging Group, UCL), where BMEIS acts as the consortium lead. NiftyNet is not intended for clinical use.

CNNbasedMedicalSegmentation - Code for reproducing the results of our paper on CNN-based medical image segmentation

  •    Python

For any questions or issues, contact Baris via: bkayalibay@gmail.com. Some of these requirements can be installed with pip install package (theano, h5py, SimpleITK), others (breze, cudamat, climin) should be cloned from the github links provided and installed via pip install -e .