android-classyshark - Executables (apk, multi-dex, jar) browser for Android, Java and Kotlin

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ClassyShark is a standalone binary inspection tool for Android developers. It can reliably browse any Android executable and show important info such as class interfaces and members, dex counts and dependencies. ClassyShark supports multiple formats including libraries (.dex, .aar, .so), executables (.apk, .jar, .class) and all Android binary XMLs: AndroidManifest, resources, layouts etc.To run, grab the latest JAR and run java -jar ClassyShark.jar.

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phan - Phan is a static analyzer for PHP

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Phan is a static analyzer for PHP that prefers to minimize false-positives. Phan attempts to prove incorrectness rather than correctness.Phan looks for common issues and will verify type compatibility on various operations when type information is available or can be deduced. Phan does not have a strong understanding of flow control and does not attempt to track values.

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streamalert - StreamAlert is a serverless, realtime data analysis framework which empowers you to ingest, analyze, and alert on data from any environment, using datasources and alerting logic you define

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StreamAlert is a serverless, realtime data analysis framework which empowers you to ingest, analyze, and alert on data from any environment, using datasources and alerting logic you define.

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turf - A modular geospatial engine written in JavaScript

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Turf is a JavaScript library for spatial analysis. It includes traditional spatial operations, helper functions for creating GeoJSON data, and data classification and statistics tools. Turf can be added to your website as a client-side plugin, or you can run Turf server-side with Node.js (see below).Download the minified file, and include it in a script tag. This will expose a global variable named turf.

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cytoscape

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Cytoscape.js is a fully featured graph theory library. Do you need to model and/or visualise relational data, like biological data or social networks? If so, Cytoscape.js is just what you need. Cytoscape.js contains a graph theory model and an optional renderer to display interactive graphs. This library was designed to make it as easy as possible for programmers and scientists to use graph theory in their apps, whether it's for server-side analysis in a Node.js app or for a rich user interface.

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sentiment - AFINN-based sentiment analysis for Node.js.

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AFINN-based sentiment analysis for Node.js

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holoviews - Stop plotting your data - annotate your data and let it visualize itself.

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Stop plotting your data - annotate your data and let it visualize itself. HoloViews is an open-source Python library designed to make data analysis and visualization seamless and simple. With HoloViews, you can usually express what you want to do in very few lines of code, letting you focus on what you are trying to explore and convey, not on the process of plotting.

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Thoth - Real-time Solr Monitor and Search Analysis Engine

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Thoth is a real-time solr monitor and search analysis engine. It's a set of tools that can help you collect, visualize and leverage data coming from your solr search infrastructure.

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PredictionIO - Machine Learning Server

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PredictionIO is an open source machine learning server for software developers to create predictive features, such as personalization, recommendation and content discovery. It helps to predict user behaviors.

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timesketch - Collaborative forensic timeline analysis

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Timesketch is an open source tool for collaborative forensic timeline analysis. Using sketches you and your collaborators can easily organize your timelines and analyze them all at the same time. Add meaning to your raw data with rich annotations, comments, tags and stars.

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awesome-single-cell - List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc

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List of software packages (and the people developing these methods) for single-cell data analysis, including RNA-seq, ATAC-seq, etc. Contributions welcome... Gender bias at conferences is a well known problem (http://www.sciencemag.org/careers/2015/07/countering-gender-bias-conferences). Creating a list of potential speakers can help mitigate this bias and a community of people developing and maintaining helps to further diversify this list beyond smaller networks.

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OpenBR - Open Source Biometric Recognition

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OpenBR is a framework for investigating new modalities, improving existing algorithms, interfacing with commercial systems, measuring recognition performance, and deploying automated biometric systems. Off-the-shelf algorithms are also available for specific modalities including Face Recognition, Age Estimation, and Gender Estimation.

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Ephyra - Question Answering System

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Ephyra is a modular and extensible framework for open domain question answering (QA). The system retrieves accurate answers to natural language questions from the Web and other sources. The goal is to give researchers the opportunity to develop new QA techniques without worrying about the end-to-end system.

question answer information-analysis data-analysis analysis knowledge semantic-search

Performance Analysis of Logs (PAL) Tool

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Ever have a performance problem, but don't know what performance counters to collect or how to analyze them? The PAL (Performance Analysis of Logs) tool is a powerful tool that reads in a performance monitor counter log and analyzes it using known thresholds.

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Pathomx - Rapid workflow-based multi-omics analysis

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Pathomx is a workflow-based tool for the analysis of metabolic pathways and visualisation of associated experimental data.

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Speect - Multilingual text-to-speech (TTS) system

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Speect is a multilingual text-to-speech (TTS) system. It offers a full TTS system (text analysis which decodes the text, and speech synthesis, which encodes the speech) with various API’s, as well as an environment for research and development of TTS systems and voices.

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stickshift - A clean & modern SQL data interface.

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A clean & modern data interface: SQL queries into JSON, CSV, and charts, done simply. This project is meant to be run as a server. See Stickshift.app for a version that works as a desktop application.

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js_data - Data manipulation and processing in JavaScript

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Data manipulation, data cleaning, and data processing in JavaScript. This guide teaches the basics of manipulating data using JavaScript in the browser, or in node.js. Specifically, these tasks are geared around preparing data for further analysis and visualization.

data-manipulation js-data data analysis visualization

Phc - The open source PHP compiler

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phc is an open source compiler for PHP with support for plugins. In addition, it can be used to pretty-print or obfuscate PHP code, as a framework for developing applications that process PHP scripts, or to convert PHP into XML and back, enabling processing of PHP scripts using XML tools. It can compile PHP source into an (optimized) executable, Combine many php scripts into a single file and lot more.

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diffstat - diff file analysis

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diffstat reads the output of diff and displays a histogram of the insertions, deletions, and modifications per-file. It is useful for reviewing large, complex patch files.

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