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CHeMS is the first Content Helper Management System (CHMS) in the world. It's fast, light and geek :-) Unlike all existent CMS, CHeMS helps you to create your site or blog but do NOT create it for you. It's without troubles geekest blogging system :-)
OSCAR (Open Source Chemistry Analysis Routines) is software for the semantic annotation of chemistry papers. The modules OPSIN (a name to structure converter) and ChemTok (a tokeniser for chemical text) are also available as standalone libraries.
PubChemSR is an MS-Windows-based data search and retrieval tool for the NCBI's public chemical database PubChem. PubChemSR makes it especially straightforward for researchers to utilize the chemical, biological and screening data available in PubChem.
Metmask is a tool written in python for managing chemical identifiers for metabolomics experiments. It can incorporate identifiers from local textfiles, several online databases, query PubChem and record all found associations in a local sqlite database.