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Bowtie, an ultrafast, memory-efficient short read aligner for short DNA sequences (reads) from next-gen sequencers. Please cite: Langmead B, et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10:R25.
B-SOLANAFunctionB-SOLANA provides a fast and accurate all-in-one approach including alignment and methylation calling of two-base encoding (â€œcolorspaceâ€�) bisulfite sequencing data. The publication of B-SOLANA in Bioinformatics can be found here Our review about primary data analysis in BS-Seq can be found here Coding languagePython (http://www.python.org/) RequirementsMinimum hardware requirements: 4 processors, 8GB RAM. Operating System requirements: B-SOLANA has been developed for Linux/UN