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Our goal is to create an open source framework and toolset for modeling dynamic cellular network functions, and to develop a user community committed to using, extending and exploiting these tools to further our knowledge of biologic processes.
The simulation of intra-cellular processes such as metabolic networks or gene expression control mechanisms has been widely covered in many tools available today1,2 however the simulation of multiple cells interacting in a common environment such as tissues is not yet fully available. Tsim (Tissue Simulator) was initially developed for the study of early growth of tumours inspired on works previously done in the area3 but unlike these studies, the simulation process in Tsim happens both inside a